Abstract
The quantum mechanics/molecular mechanics three-dimensional reference
interaction site model (QM/MM/3D-RISM) method is a three-layer hybrid
approach designed to calculate the electronic structure of complex
molecules in solution. In this study, the QM/MM/3D-RISM method was
employed to investigate electronic structure changes in ligand
molecules upon molecular recognition by the macrocyclic host molecule
cucurbit[7]uril (CB7). Thiabendazole (TBZ), a benzimidazole
derivative, was selected as the ligand, which is known for its
significant alterations in properties such as pKa, solubility,
photostability, and fluorescence intensity upon binding to CB7. The
calculations elucidated the mechanism underlying the changes in the
electronic structure induced by encapsulation, as well as the role of
solvation in these transformations.